Pipeline
========

.. automodule:: mlxmolkit.pipeline.driver
   :members:
   :undoc-members:
   :show-inheritance:

.. automodule:: mlxmolkit.pipeline.context
   :members:
   :undoc-members:
   :show-inheritance:

.. automodule:: mlxmolkit.pipeline.stage_coordgen
   :members:
   :undoc-members:
   :show-inheritance:

.. automodule:: mlxmolkit.pipeline.stage_distgeom_minimize
   :members:
   :undoc-members:
   :show-inheritance:

.. automodule:: mlxmolkit.pipeline.stage_etk_minimize
   :members:
   :undoc-members:
   :show-inheritance:

.. automodule:: mlxmolkit.pipeline.stage_stereochem_checks
   :members:
   :undoc-members:
   :show-inheritance: